sc.fiji.snt.util

Interface SNTPoint

All Known Implementing Classes:

PointInCanvas, PointInImage, SWCPoint

public interface SNTPoint

Classes extend this interface implement a point in a 3D space, always using real world coordinates.

Author:

Tiago Ferreira

Method Summary

Modifier and Type	Method and Description
static <T extends SNTPoint> T	average(java.util.Collection<T> points)
BrainAnnotation	getAnnotation()
double	getX()
double	getY()
double	getZ()
void	setAnnotation(BrainAnnotation annotation) Assigns a neuropil annotation (e.g., atlas compartment) to this point.

Method Detail

getX

double getX()

Returns:

the X-coordinate of the point

getY

double getY()

Returns:

the Y-coordinate of the point

getZ

double getZ()

Returns:

the Z-coordinate of the point

setAnnotation

void setAnnotation(BrainAnnotation annotation)

Assigns a neuropil annotation (e.g., atlas compartment) to this point.

Parameters:

annotation - the annotation to be assigned to this point

getAnnotation

BrainAnnotation getAnnotation()

Returns:

the neuropil annotation assigned to this point

average

static <T extends SNTPoint> T average(java.util.Collection<T> points)