Package | Description |
---|---|
sc.fiji.snt.gui.cmds |
Scijava-based GUIs for SNT built-in commands.
|
sc.fiji.snt.plugin |
SNT add-ons as IJ2 commands
|
Modifier and Type | Class and Description |
---|---|
class |
ChooseDatasetCmd
Implements the 'Choose Tracing Image (From Open Image)...' command.
|
class |
ColorMapReconstructionCmd
Implements Reconstruction Viewer's 'Color coding' commands.
|
class |
ComputeSecondaryImg
Implements the "Generate Secondary Image" command.
|
class |
ComputeTubenessImg
Implements the "Cache All Hessian Computations" command.
|
class |
DistributionCmd
Command for plotting distributions of morphometric properties of
Tree s |
class |
JSONImporterCmd
Command for importing a (MouseLight) JSON file
|
class |
LoadReconstructionCmd
Command for loading Reconstruction files in Reconstruction Viewer.
|
class |
MLImporterCmd
Command for importing MouseLight reconstructions
|
class |
OpenDatasetCmd
Implements the 'Choose Tracing Image (From File)...' command.
|
class |
RemoteSWCImporterCmd
Command for importing SWC reconstructions from remote databases
|
class |
TranslateReconstructionsCmd
Implements Reconstruction Viewer's 'Translate...' command.
|
Modifier and Type | Class and Description |
---|---|
class |
LocalThicknessCmd
Convenience command for running Fiji's "Local Thickness" plugin from SNT
|
class |
PlotterCmd
Implements Reconstruction Plotter, a command wrapper for interactively
plotting trees using
Viewer2D |