sc.fiji.snt.gui

Class ShollAnalysisDialog.ShollResults

java.lang.Object

sc.fiji.snt.gui.ShollAnalysisDialog.ShollResults

Enclosing class:

ShollAnalysisDialog

Deprecated.

@Deprecated
public static class ShollAnalysisDialog.ShollResults
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
ShollResults(java.util.List<ShollAnalysisDialog.ShollPoint> shollPoints, ij.ImagePlus originalImage, boolean useAllPaths, int numberOfPathsUsed, double x_start, double y_start, double z_start, java.lang.String description, int axes, int normalization, double sphereSeparation, boolean twoDimensional) Deprecated.

Method Summary

Modifier and Type	Method and Description
void	addToResultsTable() Deprecated.
void	analyzeWithShollAnalysisPlugin(java.lang.String exportDir, double primaryBranches) Deprecated.
int	crossingsAtDistanceSquared(double distanceSquared) Deprecated.
void	exportDetailToCSV(java.io.File outputFile) Deprecated.
void	exportSummaryToCSV(java.io.File outputFile) Deprecated.
double	getCriticalValue() Deprecated.
int	getDendriteMaximum() Deprecated.
double	getMaxDistanceSquared() Deprecated.
java.lang.String	getOriginalFilename() Deprecated.
double	getRegressionGradient() Deprecated.
double	getRegressionIntercept() Deprecated.
double	getRegressionRSquare() Deprecated.
double[]	getSampledCounts() Deprecated.
double[]	getSampledDistances() Deprecated.
double	getShollRegressionCoefficient() Deprecated.
java.lang.String	getSuggestedSuffix() Deprecated.
ij.ImagePlus	makeShollCrossingsImagePlus(ij.ImagePlus original) Deprecated.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ShollResults

public ShollResults(java.util.List<ShollAnalysisDialog.ShollPoint> shollPoints,
                    ij.ImagePlus originalImage,
                    boolean useAllPaths,
                    int numberOfPathsUsed,
                    double x_start,
                    double y_start,
                    double z_start,
                    java.lang.String description,
                    int axes,
                    int normalization,
                    double sphereSeparation,
                    boolean twoDimensional)

Deprecated.

Method Detail

getSampledDistances

public double[] getSampledDistances()

Deprecated.

getSampledCounts

public double[] getSampledCounts()

Deprecated.

getDendriteMaximum

public int getDendriteMaximum()

Deprecated.

getCriticalValue

public double getCriticalValue()

Deprecated.

getRegressionGradient

public double getRegressionGradient()

Deprecated.

getShollRegressionCoefficient

public double getShollRegressionCoefficient()

Deprecated.

getRegressionIntercept

public double getRegressionIntercept()

Deprecated.

getRegressionRSquare

public double getRegressionRSquare()

Deprecated.

getMaxDistanceSquared

public double getMaxDistanceSquared()

Deprecated.

getSuggestedSuffix

public java.lang.String getSuggestedSuffix()

Deprecated.

analyzeWithShollAnalysisPlugin

public void analyzeWithShollAnalysisPlugin(java.lang.String exportDir,
                                           double primaryBranches)

Deprecated.

addToResultsTable

public void addToResultsTable()

Deprecated.

crossingsAtDistanceSquared

public int crossingsAtDistanceSquared(double distanceSquared)

Deprecated.

makeShollCrossingsImagePlus

public ij.ImagePlus makeShollCrossingsImagePlus(ij.ImagePlus original)

Deprecated.

getOriginalFilename

public java.lang.String getOriginalFilename()

Deprecated.

exportSummaryToCSV

public void exportSummaryToCSV(java.io.File outputFile)
                        throws java.io.IOException

Deprecated.

Throws:

java.io.IOException

exportDetailToCSV

public void exportDetailToCSV(java.io.File outputFile)
                       throws java.io.IOException

Deprecated.

Throws:

java.io.IOException