sc.fiji.snt

Class TubularGeodesicsTracer

java.lang.Object

java.lang.Thread

sc.fiji.snt.TubularGeodesicsTracer

All Implemented Interfaces:

java.lang.Runnable, SearchInterface

public class TubularGeodesicsTracer
extends java.lang.Thread
implements SearchInterface

A tracer thread for FijiITKInterface.TubularGeodesics (assumes the tubularity add-on to be installed)

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

java.lang.Thread.State, java.lang.Thread.UncaughtExceptionHandler

Field Summary

Fields inherited from class java.lang.Thread

MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY

Constructor Summary

Constructors

Constructor and Description
TubularGeodesicsTracer(java.io.File oofFile, float start_x_image, float start_y_image, float start_z_image, float end_x_image, float end_y_image, float end_z_image, double x_spacing, double y_spacing, double z_spacing, java.lang.String spacing_units)

Method Summary

Modifier and Type	Method and Description
void	addProgressListener(SearchProgressCallback callback)
void	drawProgressOnSlice(int plane, int currentSliceInPlane, sc.fiji.snt.TracerCanvas canvas, java.awt.Graphics g)
Path	getResult()
void	reportFinished(boolean success)
void	reportProgress(float proportionDone)
void	requestStop()
void	run()

Methods inherited from class java.lang.Thread

activeCount, checkAccess, countStackFrames, currentThread, destroy, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, stop, suspend, toString, yield

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

TubularGeodesicsTracer

public TubularGeodesicsTracer(java.io.File oofFile,
                              float start_x_image,
                              float start_y_image,
                              float start_z_image,
                              float end_x_image,
                              float end_y_image,
                              float end_z_image,
                              double x_spacing,
                              double y_spacing,
                              double z_spacing,
                              java.lang.String spacing_units)

Method Detail

getResult

public Path getResult()

Specified by:

getResult in interface SearchInterface

drawProgressOnSlice

public void drawProgressOnSlice(int plane,
                                int currentSliceInPlane,
                                sc.fiji.snt.TracerCanvas canvas,
                                java.awt.Graphics g)

Specified by:

drawProgressOnSlice in interface SearchInterface

addProgressListener

public void addProgressListener(SearchProgressCallback callback)

reportProgress

public void reportProgress(float proportionDone)

requestStop

public void requestStop()

Specified by:

requestStop in interface SearchInterface

run

public void run()

Specified by:

run in interface java.lang.Runnable

Overrides:

run in class java.lang.Thread

reportFinished

public void reportFinished(boolean success)